Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 BC001981-202ENSMUST00000191393 1545 ntBASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Gm26035-201ENSMUST00000083065 308 ntBASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Gm4735-201ENSMUST00000138679 1302 ntBASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Gm5855-201ENSMUST00000200240 1305 ntBASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco4Q9JIS3 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.98□□□□□ -0.81
Smco4Q9JIS3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Gm7153-201ENSMUST00000117092 455 ntBASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Gm5177-201ENSMUST00000183092 997 ntBASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Gm33142-201ENSMUST00000193913 867 ntBASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Smco4Q9JIS3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Gm44094-201ENSMUST00000204703 2030 ntBASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Gm14132-201ENSMUST00000117188 1719 ntBASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms