Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Nip7Q9CXK8 Gm12501-201ENSMUST00000119163 529 ntBASIC15.55■□□□□ 0.08
Nip7Q9CXK8 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nip7Q9CXK8 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
Nip7Q9CXK8 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC15.55■□□□□ 0.08
Nip7Q9CXK8 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nip7Q9CXK8 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Nip7Q9CXK8 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nip7Q9CXK8 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nip7Q9CXK8 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nip7Q9CXK8 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nip7Q9CXK8 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nip7Q9CXK8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Gm5847-201ENSMUST00000178959 1595 ntBASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Gm11941-201ENSMUST00000119904 610 ntBASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Gm25881-201ENSMUST00000157783 103 ntBASIC15.54■□□□□ 0.08
Nip7Q9CXK8 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC15.54■□□□□ 0.08
Nip7Q9CXK8 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Gm37246-201ENSMUST00000192665 835 ntBASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 AC154849.4-201ENSMUST00000224868 365 ntBASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Gm5455-201ENSMUST00000058710 715 ntBASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nip7Q9CXK8 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Gm23596-201ENSMUST00000104304 132 ntBASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Gm7851-201ENSMUST00000117574 323 ntBASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Gm12196-201ENSMUST00000120954 262 ntBASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Gm15782-201ENSMUST00000121073 445 ntBASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 H2-Q3-201ENSMUST00000172583 608 ntBASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Gm1821-202ENSMUST00000227415 750 ntBASIC15.53■□□□□ 0.08
Nip7Q9CXK8 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Nip7Q9CXK8 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nip7Q9CXK8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nip7Q9CXK8 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nip7Q9CXK8 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nip7Q9CXK8 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Nip7Q9CXK8 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Nip7Q9CXK8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nip7Q9CXK8 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
Nip7Q9CXK8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nip7Q9CXK8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms