Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm6023-201ENSMUST00000118217 606 ntBASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Gm45880-201ENSMUST00000213041 853 ntBASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Gm45925-201ENSMUST00000218882 744 ntBASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa3Q9CQ71 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Mir1247-201ENSMUST00000116706 82 ntBASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Gm11964-201ENSMUST00000120982 444 ntBASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Rmrp-201ENSMUST00000157463 271 ntBASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Gm17420-201ENSMUST00000164753 153 ntBASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Gm38002-201ENSMUST00000193255 180 ntBASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Gm45930-201ENSMUST00000221330 292 ntBASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa3Q9CQ71 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Gm8018-201ENSMUST00000173536 789 ntBASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa3Q9CQ71 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms