Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Map1b-203ENSMUST00000223725 2669 ntBASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Gm27989-201ENSMUST00000184721 107 ntBASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.3□□□□□ -0.6
Krt88Q9CPR6 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Krt88Q9CPR6 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Gm13689-201ENSMUST00000119360 685 ntBASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.29□□□□□ -0.6
Krt88Q9CPR6 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Gm27838-201ENSMUST00000184829 128 ntBASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.29□□□□□ -0.6
Krt88Q9CPR6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms