Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim33Q99PP7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim33Q99PP7 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trim33Q99PP7 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim33Q99PP7 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim33Q99PP7 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim33Q99PP7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim33Q99PP7 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC12.51□□□□□ -0.41
Trim33Q99PP7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Gm23363-201ENSMUST00000175024 79 ntBASIC12.51□□□□□ -0.41
Trim33Q99PP7 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Gm27514-201ENSMUST00000183692 110 ntBASIC12.51□□□□□ -0.41
Trim33Q99PP7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.51□□□□□ -0.41
Trim33Q99PP7 AY702102-202ENSMUST00000194651 1173 ntBASIC12.51□□□□□ -0.41
Trim33Q99PP7 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.51□□□□□ -0.41
Trim33Q99PP7 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.51□□□□□ -0.41
Trim33Q99PP7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim33Q99PP7 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.5□□□□□ -0.41
Trim33Q99PP7 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Gm25927-201ENSMUST00000175058 117 ntBASIC12.5□□□□□ -0.41
Trim33Q99PP7 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Mir339-201ENSMUST00000083659 96 ntBASIC12.5□□□□□ -0.41
Trim33Q99PP7 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.5□□□□□ -0.41
Trim33Q99PP7 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim33Q99PP7 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim33Q99PP7 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms