Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Gm12390-201ENSMUST00000117897 397 ntBASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Gm14704-201ENSMUST00000120300 874 ntBASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Gm4271-201ENSMUST00000174444 973 ntBASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chmp1b1Q99LU0 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms