Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clp1Q99LI9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Gm24891-201ENSMUST00000104391 136 ntBASIC13.2□□□□□ -0.3
Clp1Q99LI9 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Defa-ps4-201ENSMUST00000118021 183 ntBASIC13.2□□□□□ -0.3
Clp1Q99LI9 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Gm3332-201ENSMUST00000189337 928 ntBASIC13.2□□□□□ -0.3
Clp1Q99LI9 Gm43184-201ENSMUST00000197247 542 ntBASIC13.2□□□□□ -0.3
Clp1Q99LI9 Gm6905-201ENSMUST00000205729 511 ntBASIC13.2□□□□□ -0.3
Clp1Q99LI9 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.2□□□□□ -0.3
Clp1Q99LI9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.19□□□□□ -0.3
Clp1Q99LI9 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.19□□□□□ -0.3
Clp1Q99LI9 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.19□□□□□ -0.3
Clp1Q99LI9 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.19□□□□□ -0.3
Clp1Q99LI9 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.19□□□□□ -0.3
Clp1Q99LI9 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.19□□□□□ -0.3
Clp1Q99LI9 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clp1Q99LI9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms