Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdha9Q91Y11 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Gm23119-201ENSMUST00000158610 140 ntBASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Gm5950-201ENSMUST00000213337 772 ntBASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Gm9368-201ENSMUST00000219348 831 ntBASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdha9Q91Y11 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Gm25043-201ENSMUST00000158604 212 ntBASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Gm44958-201ENSMUST00000203734 736 ntBASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdha9Q91Y11 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Gm11531-201ENSMUST00000117614 555 ntBASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Gm11222-201ENSMUST00000119005 738 ntBASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Gm9083-201ENSMUST00000120423 819 ntBASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Mir1938-201ENSMUST00000158746 100 ntBASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms