Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb1Q91Y08 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb1Q91Y08 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb1Q91Y08 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.02□□□□□ -0.32
Pcdhb1Q91Y08 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb1Q91Y08 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdhb1Q91Y08 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb1Q91Y08 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb1Q91Y08 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb1Q91Y08 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.02□□□□□ -0.32
Pcdhb1Q91Y08 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Gm13736-201ENSMUST00000119272 253 ntBASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Snora78-201ENSMUST00000158630 128 ntBASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Gm9899-201ENSMUST00000065519 555 ntBASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhb1Q91Y08 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Gm5370-201ENSMUST00000187187 574 ntBASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Gm6007-201ENSMUST00000208170 823 ntBASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhb1Q91Y08 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms