Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Gm11591-201ENSMUST00000120063 702 ntBASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Gm15703-201ENSMUST00000120250 880 ntBASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubqln1Q8R317 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Gm12502-201ENSMUST00000120197 444 ntBASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.9□□□□□ -0.5
Ubqln1Q8R317 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ubqln1Q8R317 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ubqln1Q8R317 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.51
Ubqln1Q8R317 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.89□□□□□ -0.51
Ubqln1Q8R317 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ubqln1Q8R317 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ubqln1Q8R317 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubqln1Q8R317 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubqln1Q8R317 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubqln1Q8R317 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubqln1Q8R317 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Ubqln1Q8R317 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubqln1Q8R317 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubqln1Q8R317 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubqln1Q8R317 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubqln1Q8R317 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubqln1Q8R317 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ubqln1Q8R317 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubqln1Q8R317 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms