Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Gm10268-201ENSMUST00000085340 555 ntBASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cchcr1Q8K2I2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cchcr1Q8K2I2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Paupar-201ENSMUST00000194826 3482 ntBASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Gm11964-201ENSMUST00000120982 444 ntBASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Gm8227-201ENSMUST00000223306 571 ntBASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cchcr1Q8K2I2 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Gm7063-201ENSMUST00000186840 981 ntBASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms