Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Gm14017-201ENSMUST00000121934 386 ntBASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Gm18304-201ENSMUST00000189162 546 ntBASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Gm44262-201ENSMUST00000204969 372 ntBASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rdh1Q8CGV4 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Gm2260-201ENSMUST00000184965 657 ntBASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Gm37466-201ENSMUST00000195692 652 ntBASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Gm5363-201ENSMUST00000211927 938 ntBASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rdh1Q8CGV4 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 Gm9083-201ENSMUST00000120423 819 ntBASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 Gm6963-201ENSMUST00000147879 379 ntBASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.16□□□□□ -0.46
Rdh1Q8CGV4 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms