Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Gm14058-201ENSMUST00000116082 735 ntBASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Gm4607-201ENSMUST00000206649 577 ntBASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 AC133602.1-201ENSMUST00000227510 509 ntBASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Mir219a-1-201ENSMUST00000083621 110 ntBASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Gm21811-201ENSMUST00000096485 930 ntBASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Gm11941-201ENSMUST00000119904 610 ntBASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Gm12196-201ENSMUST00000120954 262 ntBASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Gm12164-201ENSMUST00000121695 551 ntBASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Gm24514-201ENSMUST00000174961 285 ntBASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Gm27530-201ENSMUST00000184096 98 ntBASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Gm19353-201ENSMUST00000184561 445 ntBASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Ighv4-2-201ENSMUST00000192975 362 ntBASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Gm18393-201ENSMUST00000208349 1131 ntBASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim52Q8CDV4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Gm6580-201ENSMUST00000117504 1357 ntBASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Gm26286-201ENSMUST00000104166 134 ntBASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Gm8343-201ENSMUST00000182705 994 ntBASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Gm9361-201ENSMUST00000198695 1507 ntBASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trim52Q8CDV4 Gm18782-201ENSMUST00000209023 1399 ntBASIC15.36■□□□□ 0.05
Trim52Q8CDV4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim52Q8CDV4 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim52Q8CDV4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim52Q8CDV4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim52Q8CDV4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim52Q8CDV4 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim52Q8CDV4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim52Q8CDV4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim52Q8CDV4 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trim52Q8CDV4 Mir680-2-201ENSMUST00000102163 110 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms