Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Gm12928-201ENSMUST00000117115 573 ntBASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Gm6266-201ENSMUST00000203844 806 ntBASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Gm7287-201ENSMUST00000205267 602 ntBASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Gm25857-201ENSMUST00000082788 129 ntBASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lrif1Q8CDD9 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Gm11814-201ENSMUST00000119515 929 ntBASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lrif1Q8CDD9 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lrif1Q8CDD9 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lrif1Q8CDD9 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lrif1Q8CDD9 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lrif1Q8CDD9 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Gm8227-201ENSMUST00000223306 571 ntBASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms