Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm19309-201ENSMUST00000218295 205 ntBASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim9Q8C7M3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Gm38002-201ENSMUST00000193255 180 ntBASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Gm43133-201ENSMUST00000197472 463 ntBASIC13.8□□□□□ -0.2
Trim9Q8C7M3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Gm18062-201ENSMUST00000208020 547 ntBASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Gm18055-201ENSMUST00000208254 547 ntBASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim9Q8C7M3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Gm6023-201ENSMUST00000118217 606 ntBASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Gm13875-201ENSMUST00000120162 282 ntBASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Mir7085-201ENSMUST00000184353 66 ntBASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Gm6007-201ENSMUST00000208170 823 ntBASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trim9Q8C7M3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms