Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.07□□□□□ -0.32
Sh3rf3Q8C120 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Gm11964-201ENSMUST00000120982 444 ntBASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Gm27514-201ENSMUST00000183692 110 ntBASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Mir7085-201ENSMUST00000184353 66 ntBASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Gm18584-201ENSMUST00000203098 964 ntBASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Gm24526-201ENSMUST00000082921 158 ntBASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sh3rf3Q8C120 Daam2-202ENSMUST00000224595 1926 ntBASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Gm15703-201ENSMUST00000120250 880 ntBASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Gm14760-201ENSMUST00000121831 999 ntBASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sh3rf3Q8C120 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms