Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Gm5370-201ENSMUST00000187187 574 ntBASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Gm37008-201ENSMUST00000195712 319 ntBASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.92□□□□□ -0.34
Trub1Q8C0D0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Gm18304-201ENSMUST00000189162 546 ntBASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trub1Q8C0D0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Gm12314-201ENSMUST00000118104 538 ntBASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Gm13342-201ENSMUST00000121055 207 ntBASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Gm6007-201ENSMUST00000208170 823 ntBASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.9□□□□□ -0.34
Trub1Q8C0D0 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trub1Q8C0D0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trub1Q8C0D0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms