Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Rmrp-201ENSMUST00000157463 271 ntBASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Gm43378-201ENSMUST00000199336 582 ntBASIC13.29□□□□□ -0.28
Rd3Q8BRE0 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Gm14263-201ENSMUST00000117955 746 ntBASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Gm20426-201ENSMUST00000173657 440 ntBASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.28□□□□□ -0.28
Rd3Q8BRE0 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.28□□□□□ -0.28
Rd3Q8BRE0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rd3Q8BRE0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rd3Q8BRE0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.27□□□□□ -0.28
Rd3Q8BRE0 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Rd3Q8BRE0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rd3Q8BRE0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rd3Q8BRE0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rd3Q8BRE0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
Rd3Q8BRE0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rd3Q8BRE0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rd3Q8BRE0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gm12015-201ENSMUST00000117065 843 ntBASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gm29615-201ENSMUST00000185371 697 ntBASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gm28224-201ENSMUST00000186078 697 ntBASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gm29001-201ENSMUST00000186177 697 ntBASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gm28292-201ENSMUST00000186593 697 ntBASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gm28101-201ENSMUST00000187608 697 ntBASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gm29076-201ENSMUST00000187689 697 ntBASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gm28302-201ENSMUST00000187931 697 ntBASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gm28646-201ENSMUST00000188220 697 ntBASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gm28205-201ENSMUST00000189177 697 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms