Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Slc5a7Q8BGY9 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Slc5a7Q8BGY9 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.96□□□□□ -0.66
Slc5a7Q8BGY9 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Slc5a7Q8BGY9 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Slc5a7Q8BGY9 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Slc5a7Q8BGY9 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Slc5a7Q8BGY9 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Slc5a7Q8BGY9 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Slc5a7Q8BGY9 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Slc5a7Q8BGY9 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Slc5a7Q8BGY9 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Slc5a7Q8BGY9 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Slc5a7Q8BGY9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Slc5a7Q8BGY9 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Slc5a7Q8BGY9 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Slc5a7Q8BGY9 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Slc5a7Q8BGY9 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Slc5a7Q8BGY9 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Slc5a7Q8BGY9 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Slc5a7Q8BGY9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Gm14350-201ENSMUST00000116642 640 ntBASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Gm27525-201ENSMUST00000184465 107 ntBASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Gm7775-201ENSMUST00000218871 853 ntBASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 AC165157.4-201ENSMUST00000220587 139 ntBASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Slc5a7Q8BGY9 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms