Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh19Q80TF3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.33□□□□□ -0.43
Pcdh19Q80TF3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdh19Q80TF3 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdh19Q80TF3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Gm13665-201ENSMUST00000120830 528 ntBASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh19Q80TF3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Gm2383-201ENSMUST00000181461 807 ntBASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Gm38317-201ENSMUST00000195564 343 ntBASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Gm10076-201ENSMUST00000073238 384 ntBASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Gm10312-201ENSMUST00000078515 489 ntBASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh19Q80TF3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms