Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.67□□□□□ -0.54
Pif1Q80SX8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.67□□□□□ -0.54
Pif1Q80SX8 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.67□□□□□ -0.54
Pif1Q80SX8 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.66□□□□□ -0.54
Pif1Q80SX8 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Pck2-205ENSMUST00000226352 2784 ntBASIC11.66□□□□□ -0.54
Pif1Q80SX8 Paupar-201ENSMUST00000194826 3482 ntBASIC11.66□□□□□ -0.54
Pif1Q80SX8 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Gm12217-201ENSMUST00000118858 696 ntBASIC11.66□□□□□ -0.54
Pif1Q80SX8 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pif1Q80SX8 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Mir6927-201ENSMUST00000184494 71 ntBASIC11.66□□□□□ -0.54
Pif1Q80SX8 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pif1Q80SX8 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.65□□□□□ -0.54
Pif1Q80SX8 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms