Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcc2Q6PDG5 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Gm8738-201ENSMUST00000172606 329 ntBASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Gm27501-201ENSMUST00000183599 107 ntBASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcc2Q6PDG5 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Gm43179-201ENSMUST00000198797 275 ntBASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Gm18935-201ENSMUST00000212692 664 ntBASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcc2Q6PDG5 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Olfr284-202ENSMUST00000206647 966 ntBASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Gm10608-202ENSMUST00000213924 676 ntBASIC14.6□□□□□ -0.07
Smarcc2Q6PDG5 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms