Protein–RNA interactions for Protein: Q62141

Sin3b, Paired amphipathic helix protein Sin3b, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sin3bQ62141 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Sin3bQ62141 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Sin3bQ62141 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 Gm4768-201ENSMUST00000206199 686 ntBASIC13.33□□□□□ -0.28
Sin3bQ62141 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.33□□□□□ -0.28
Sin3bQ62141 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.33□□□□□ -0.28
Sin3bQ62141 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sin3bQ62141 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sin3bQ62141 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Sin3bQ62141 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sin3bQ62141 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Sin3bQ62141 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sin3bQ62141 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sin3bQ62141 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Sin3bQ62141 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.32□□□□□ -0.28
Sin3bQ62141 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.32□□□□□ -0.28
Sin3bQ62141 Gm12363-201ENSMUST00000122250 668 ntBASIC13.32□□□□□ -0.28
Sin3bQ62141 Gm24644-201ENSMUST00000157114 139 ntBASIC13.32□□□□□ -0.28
Sin3bQ62141 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.32□□□□□ -0.28
Sin3bQ62141 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.32□□□□□ -0.28
Sin3bQ62141 Gm38092-201ENSMUST00000195600 653 ntBASIC13.32□□□□□ -0.28
Sin3bQ62141 Gm19163-201ENSMUST00000223313 780 ntBASIC13.32□□□□□ -0.28
Sin3bQ62141 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.32□□□□□ -0.28
Sin3bQ62141 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Sin3bQ62141 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Sin3bQ62141 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.32□□□□□ -0.28
Sin3bQ62141 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sin3bQ62141 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Sin3bQ62141 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.31□□□□□ -0.28
Sin3bQ62141 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sin3bQ62141 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sin3bQ62141 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sin3bQ62141 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sin3bQ62141 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sin3bQ62141 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sin3bQ62141 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sin3bQ62141 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Sin3bQ62141 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.31□□□□□ -0.28
Sin3bQ62141 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sin3bQ62141 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sin3bQ62141 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.31□□□□□ -0.28
Sin3bQ62141 Gm29705-201ENSMUST00000212598 474 ntBASIC13.31□□□□□ -0.28
Sin3bQ62141 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sin3bQ62141 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sin3bQ62141 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Sin3bQ62141 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sin3bQ62141 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sin3bQ62141 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sin3bQ62141 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sin3bQ62141 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sin3bQ62141 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.31□□□□□ -0.28
Sin3bQ62141 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sin3bQ62141 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sin3bQ62141 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sin3bQ62141 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.31□□□□□ -0.28
Sin3bQ62141 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms