Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.45□□□□□ -0.58
VcanQ62059 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VcanQ62059 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.45□□□□□ -0.58
VcanQ62059 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VcanQ62059 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
VcanQ62059 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VcanQ62059 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
VcanQ62059 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
VcanQ62059 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.45□□□□□ -0.58
VcanQ62059 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.45□□□□□ -0.58
VcanQ62059 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
VcanQ62059 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.45□□□□□ -0.58
VcanQ62059 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VcanQ62059 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VcanQ62059 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VcanQ62059 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
VcanQ62059 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
VcanQ62059 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.44□□□□□ -0.58
VcanQ62059 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.44□□□□□ -0.58
VcanQ62059 Gm27956-201ENSMUST00000175604 260 ntBASIC11.44□□□□□ -0.58
VcanQ62059 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.44□□□□□ -0.58
VcanQ62059 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.44□□□□□ -0.58
VcanQ62059 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.44□□□□□ -0.58
VcanQ62059 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.44□□□□□ -0.58
VcanQ62059 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.44□□□□□ -0.58
VcanQ62059 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.44□□□□□ -0.58
VcanQ62059 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
VcanQ62059 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
VcanQ62059 AA623943-201ENSMUST00000121794 354 ntBASIC11.44□□□□□ -0.58
VcanQ62059 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC11.44□□□□□ -0.58
VcanQ62059 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.44□□□□□ -0.58
VcanQ62059 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.44□□□□□ -0.58
VcanQ62059 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.44□□□□□ -0.58
VcanQ62059 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.44□□□□□ -0.58
VcanQ62059 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
VcanQ62059 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.44□□□□□ -0.58
VcanQ62059 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.44□□□□□ -0.58
VcanQ62059 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
VcanQ62059 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
VcanQ62059 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
VcanQ62059 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.44□□□□□ -0.58
VcanQ62059 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
VcanQ62059 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
VcanQ62059 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.43□□□□□ -0.58
VcanQ62059 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
VcanQ62059 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VcanQ62059 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VcanQ62059 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VcanQ62059 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.43□□□□□ -0.58
VcanQ62059 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VcanQ62059 Gm12736-201ENSMUST00000119330 236 ntBASIC11.43□□□□□ -0.58
VcanQ62059 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC11.43□□□□□ -0.58
VcanQ62059 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC11.43□□□□□ -0.58
VcanQ62059 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VcanQ62059 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VcanQ62059 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
VcanQ62059 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VcanQ62059 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VcanQ62059 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VcanQ62059 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VcanQ62059 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VcanQ62059 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VcanQ62059 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VcanQ62059 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VcanQ62059 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.43□□□□□ -0.58
VcanQ62059 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VcanQ62059 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VcanQ62059 Gm45575-201ENSMUST00000210283 548 ntBASIC11.43□□□□□ -0.58
VcanQ62059 Gm4930-201ENSMUST00000219926 1087 ntBASIC11.43□□□□□ -0.58
VcanQ62059 Gm18499-201ENSMUST00000220808 1021 ntBASIC11.43□□□□□ -0.58
VcanQ62059 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
VcanQ62059 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VcanQ62059 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.43□□□□□ -0.58
VcanQ62059 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
VcanQ62059 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
VcanQ62059 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Gm15620-201ENSMUST00000122949 270 ntBASIC11.42□□□□□ -0.58
VcanQ62059 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Gm42816-201ENSMUST00000198433 325 ntBASIC11.42□□□□□ -0.58
VcanQ62059 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms