Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.29□□□□□ -0.12
Foxn1Q61575 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxn1Q61575 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Foxn1Q61575 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Foxn1Q61575 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxn1Q61575 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Foxn1Q61575 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxn1Q61575 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Foxn1Q61575 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Foxn1Q61575 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.28□□□□□ -0.12
Foxn1Q61575 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.28□□□□□ -0.12
Foxn1Q61575 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC14.28□□□□□ -0.12
Foxn1Q61575 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.28□□□□□ -0.12
Foxn1Q61575 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Foxn1Q61575 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Gm42941-201ENSMUST00000200347 1321 ntBASIC14.28□□□□□ -0.12
Foxn1Q61575 Gm42657-201ENSMUST00000201746 211 ntBASIC14.28□□□□□ -0.12
Foxn1Q61575 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.28□□□□□ -0.12
Foxn1Q61575 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC14.28□□□□□ -0.12
Foxn1Q61575 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.28□□□□□ -0.12
Foxn1Q61575 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Foxn1Q61575 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxn1Q61575 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxn1Q61575 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxn1Q61575 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.27□□□□□ -0.12
Foxn1Q61575 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Foxn1Q61575 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxn1Q61575 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.27□□□□□ -0.12
Foxn1Q61575 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxn1Q61575 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Foxn1Q61575 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Foxn1Q61575 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Foxn1Q61575 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Foxn1Q61575 Gm16071-201ENSMUST00000119589 793 ntBASIC14.27□□□□□ -0.13
Foxn1Q61575 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.27□□□□□ -0.13
Foxn1Q61575 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.27□□□□□ -0.13
Foxn1Q61575 Gm18159-201ENSMUST00000174516 1070 ntBASIC14.27□□□□□ -0.13
Foxn1Q61575 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxn1Q61575 Gm17826-201ENSMUST00000189720 798 ntBASIC14.27□□□□□ -0.13
Foxn1Q61575 Gm9645-201ENSMUST00000197131 792 ntBASIC14.27□□□□□ -0.13
Foxn1Q61575 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC14.27□□□□□ -0.13
Foxn1Q61575 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxn1Q61575 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.27□□□□□ -0.13
Foxn1Q61575 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.27□□□□□ -0.13
Foxn1Q61575 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Foxn1Q61575 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxn1Q61575 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxn1Q61575 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxn1Q61575 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxn1Q61575 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxn1Q61575 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxn1Q61575 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxn1Q61575 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxn1Q61575 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxn1Q61575 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxn1Q61575 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxn1Q61575 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxn1Q61575 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxn1Q61575 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxn1Q61575 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxn1Q61575 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxn1Q61575 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Foxn1Q61575 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxn1Q61575 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxn1Q61575 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxn1Q61575 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Foxn1Q61575 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxn1Q61575 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxn1Q61575 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxn1Q61575 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxn1Q61575 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxn1Q61575 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Foxn1Q61575 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Foxn1Q61575 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Foxn1Q61575 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Foxn1Q61575 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC14.26□□□□□ -0.13
Foxn1Q61575 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxn1Q61575 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.26□□□□□ -0.13
Foxn1Q61575 CT025553.1-201ENSMUST00000226292 299 ntBASIC14.26□□□□□ -0.13
Foxn1Q61575 CT025602.2-201ENSMUST00000226553 772 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms