Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.74□□□□□ -0.53
Sox17Q61473 Gm8227-201ENSMUST00000223306 571 ntBASIC11.74□□□□□ -0.53
Sox17Q61473 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox17Q61473 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sox17Q61473 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox17Q61473 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sox17Q61473 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Sox17Q61473 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sox17Q61473 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox17Q61473 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sox17Q61473 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox17Q61473 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox17Q61473 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sox17Q61473 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sox17Q61473 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sox17Q61473 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sox17Q61473 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Gm22189-201ENSMUST00000103822 86 ntBASIC11.73□□□□□ -0.53
Sox17Q61473 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Gm28693-202ENSMUST00000190758 331 ntBASIC11.73□□□□□ -0.53
Sox17Q61473 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.73□□□□□ -0.53
Sox17Q61473 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.73□□□□□ -0.53
Sox17Q61473 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.73□□□□□ -0.53
Sox17Q61473 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.73□□□□□ -0.53
Sox17Q61473 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox17Q61473 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.73□□□□□ -0.53
Sox17Q61473 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox17Q61473 Itm2b-204ENSMUST00000228637 783 ntBASIC11.73□□□□□ -0.53
Sox17Q61473 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sox17Q61473 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Sox17Q61473 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sox17Q61473 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox17Q61473 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox17Q61473 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox17Q61473 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox17Q61473 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sox17Q61473 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox17Q61473 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox17Q61473 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Sox17Q61473 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox17Q61473 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox17Q61473 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox17Q61473 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox17Q61473 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox17Q61473 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox17Q61473 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox17Q61473 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox17Q61473 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Sox17Q61473 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sox17Q61473 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox17Q61473 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox17Q61473 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox17Q61473 Gm15321-201ENSMUST00000121290 288 ntBASIC11.72□□□□□ -0.53
Sox17Q61473 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.72□□□□□ -0.53
Sox17Q61473 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox17Q61473 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox17Q61473 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.72□□□□□ -0.53
Sox17Q61473 Gm6736-201ENSMUST00000166583 948 ntBASIC11.72□□□□□ -0.53
Sox17Q61473 Gm27838-201ENSMUST00000184829 128 ntBASIC11.72□□□□□ -0.53
Sox17Q61473 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.72□□□□□ -0.53
Sox17Q61473 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.72□□□□□ -0.53
Sox17Q61473 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox17Q61473 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox17Q61473 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox17Q61473 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox17Q61473 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox17Q61473 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.72□□□□□ -0.53
Sox17Q61473 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sox17Q61473 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sox17Q61473 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox17Q61473 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox17Q61473 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sox17Q61473 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sox17Q61473 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms