Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.26□□□□□ -0.45
Sim2Q61079 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sim2Q61079 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.26□□□□□ -0.45
Sim2Q61079 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sim2Q61079 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sim2Q61079 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sim2Q61079 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.25□□□□□ -0.45
Sim2Q61079 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sim2Q61079 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.25□□□□□ -0.45
Sim2Q61079 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Sim2Q61079 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.25□□□□□ -0.45
Sim2Q61079 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Sim2Q61079 Gm15881-201ENSMUST00000148792 942 ntBASIC12.25□□□□□ -0.45
Sim2Q61079 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sim2Q61079 Mir6546-201ENSMUST00000184460 62 ntBASIC12.25□□□□□ -0.45
Sim2Q61079 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.25□□□□□ -0.45
Sim2Q61079 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.25□□□□□ -0.45
Sim2Q61079 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.25□□□□□ -0.45
Sim2Q61079 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.25□□□□□ -0.45
Sim2Q61079 Gm6905-201ENSMUST00000205729 511 ntBASIC12.25□□□□□ -0.45
Sim2Q61079 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sim2Q61079 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Gm17827-201ENSMUST00000211825 742 ntBASIC12.25□□□□□ -0.45
Sim2Q61079 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.25□□□□□ -0.45
Sim2Q61079 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.25□□□□□ -0.45
Sim2Q61079 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Sim2Q61079 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.25□□□□□ -0.45
Sim2Q61079 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sim2Q61079 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.24□□□□□ -0.45
Sim2Q61079 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sim2Q61079 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.24□□□□□ -0.45
Sim2Q61079 Gm7851-201ENSMUST00000117574 323 ntBASIC12.24□□□□□ -0.45
Sim2Q61079 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.24□□□□□ -0.45
Sim2Q61079 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.24□□□□□ -0.45
Sim2Q61079 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sim2Q61079 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.24□□□□□ -0.45
Sim2Q61079 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.24□□□□□ -0.45
Sim2Q61079 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.24□□□□□ -0.45
Sim2Q61079 Gm9132-201ENSMUST00000210182 832 ntBASIC12.24□□□□□ -0.45
Sim2Q61079 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.24□□□□□ -0.45
Sim2Q61079 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sim2Q61079 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sim2Q61079 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.24□□□□□ -0.45
Sim2Q61079 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.24□□□□□ -0.45
Sim2Q61079 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Ginm1-202ENSMUST00000065124 300 ntBASIC12.24□□□□□ -0.45
Sim2Q61079 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sim2Q61079 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms