Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Slc6a4Q60857 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.84□□□□□ -0.35
Slc6a4Q60857 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a4Q60857 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Slc6a4Q60857 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slc6a4Q60857 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.83□□□□□ -0.35
Slc6a4Q60857 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Slc6a4Q60857 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Slc6a4Q60857 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Slc6a4Q60857 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Gm12997-201ENSMUST00000120207 640 ntBASIC12.83□□□□□ -0.36
Slc6a4Q60857 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.83□□□□□ -0.36
Slc6a4Q60857 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.83□□□□□ -0.36
Slc6a4Q60857 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slc6a4Q60857 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.82□□□□□ -0.36
Slc6a4Q60857 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.82□□□□□ -0.36
Slc6a4Q60857 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Gm13665-201ENSMUST00000120830 528 ntBASIC12.82□□□□□ -0.36
Slc6a4Q60857 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Gm5070-201ENSMUST00000177599 862 ntBASIC12.82□□□□□ -0.36
Slc6a4Q60857 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.82□□□□□ -0.36
Slc6a4Q60857 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.82□□□□□ -0.36
Slc6a4Q60857 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Slc6a4Q60857 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.82□□□□□ -0.36
Slc6a4Q60857 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.82□□□□□ -0.36
Slc6a4Q60857 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc6a4Q60857 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms