Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Gm43125-201ENSMUST00000201724 730 ntBASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 AC149588.3-201ENSMUST00000227515 150 ntBASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav3-3Q5R1C3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Gm10253-201ENSMUST00000194270 940 ntBASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Gm16476-201ENSMUST00000221544 139 ntBASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 AC133598.3-202ENSMUST00000224219 531 ntBASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Gm8337-201ENSMUST00000187358 1938 ntBASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav3-3Q5R1C3 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms