Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Gm11560-201ENSMUST00000117567 948 ntBASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Gm18561-201ENSMUST00000206027 804 ntBASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13aQ5H8C4 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 AC107763.1-201ENSMUST00000226082 1365 ntBASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Gm17796-201ENSMUST00000189015 1213 ntBASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13aQ5H8C4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Gm15620-201ENSMUST00000122949 270 ntBASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Gm6644-201ENSMUST00000186507 951 ntBASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Gm4775-201ENSMUST00000169588 402 ntBASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms