Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Gm17812-201ENSMUST00000204935 318 ntBASIC11.56□□□□□ -0.56
Urb1Q571H0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Urb1Q571H0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Urb1Q571H0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Urb1Q571H0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Urb1Q571H0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.55□□□□□ -0.56
Urb1Q571H0 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Urb1Q571H0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Urb1Q571H0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.55□□□□□ -0.56
Urb1Q571H0 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.55□□□□□ -0.56
Urb1Q571H0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.55□□□□□ -0.56
Urb1Q571H0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Urb1Q571H0 Cog3-203ENSMUST00000227473 4197 ntBASIC11.55□□□□□ -0.56
Urb1Q571H0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Urb1Q571H0 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.55□□□□□ -0.56
Urb1Q571H0 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.55□□□□□ -0.56
Urb1Q571H0 Gm38210-201ENSMUST00000191944 809 ntBASIC11.55□□□□□ -0.56
Urb1Q571H0 Gm32999-201ENSMUST00000192693 562 ntBASIC11.55□□□□□ -0.56
Urb1Q571H0 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Urb1Q571H0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Urb1Q571H0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.54□□□□□ -0.56
Urb1Q571H0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Urb1Q571H0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Gm14460-201ENSMUST00000121511 639 ntBASIC11.54□□□□□ -0.56
Urb1Q571H0 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.54□□□□□ -0.56
Urb1Q571H0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.54□□□□□ -0.56
Urb1Q571H0 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC11.54□□□□□ -0.56
Urb1Q571H0 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.54□□□□□ -0.56
Urb1Q571H0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.54□□□□□ -0.56
Urb1Q571H0 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.54□□□□□ -0.56
Urb1Q571H0 Gm17827-201ENSMUST00000211825 742 ntBASIC11.54□□□□□ -0.56
Urb1Q571H0 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.54□□□□□ -0.56
Urb1Q571H0 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.54□□□□□ -0.56
Urb1Q571H0 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.54□□□□□ -0.56
Urb1Q571H0 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.54□□□□□ -0.56
Urb1Q571H0 Mir339-201ENSMUST00000083659 96 ntBASIC11.54□□□□□ -0.56
Urb1Q571H0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Urb1Q571H0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.54□□□□□ -0.56
Urb1Q571H0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Urb1Q571H0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Urb1Q571H0 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Urb1Q571H0 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Urb1Q571H0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Urb1Q571H0 Gm5616-201ENSMUST00000165252 384 ntBASIC11.53□□□□□ -0.56
Urb1Q571H0 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Urb1Q571H0 Gm8741-201ENSMUST00000174736 384 ntBASIC11.53□□□□□ -0.56
Urb1Q571H0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Urb1Q571H0 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Urb1Q571H0 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Urb1Q571H0 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Urb1Q571H0 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Urb1Q571H0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Urb1Q571H0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms