Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm9111-201ENSMUST00000219394 709 ntBASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fam196aQ3USH1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.59□□□□□ -0.39
Fam196aQ3USH1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Gm14219-201ENSMUST00000120414 288 ntBASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Gm37299-201ENSMUST00000193951 826 ntBASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Gm9139-201ENSMUST00000218817 700 ntBASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.59□□□□□ -0.39
Fam196aQ3USH1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fam196aQ3USH1 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.58□□□□□ -0.39
Fam196aQ3USH1 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Fam196aQ3USH1 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Fam196aQ3USH1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.58□□□□□ -0.39
Fam196aQ3USH1 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Fam196aQ3USH1 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Fam196aQ3USH1 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Gm12857-201ENSMUST00000117678 592 ntBASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Gm44980-201ENSMUST00000205826 314 ntBASIC12.58□□□□□ -0.4
Fam196aQ3USH1 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fam196aQ3USH1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms