Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Gm38188-201ENSMUST00000192879 856 ntBASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Gm45059-201ENSMUST00000205558 1077 ntBASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Gm8227-201ENSMUST00000223306 571 ntBASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Shisa3Q3UPR0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Gm13689-201ENSMUST00000119360 685 ntBASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Gm27701-201ENSMUST00000184498 110 ntBASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Gm28911-201ENSMUST00000188837 117 ntBASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Shisa3Q3UPR0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Shisa3Q3UPR0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms