Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Cks1brtQ3UNC9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Gm12017-201ENSMUST00000122453 1003 ntBASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Gm27390-201ENSMUST00000184516 176 ntBASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Gm33320-201ENSMUST00000192232 530 ntBASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Gm38225-201ENSMUST00000194001 393 ntBASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Gm6916-202ENSMUST00000205523 195 ntBASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Gm18669-201ENSMUST00000216049 778 ntBASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1brtQ3UNC9 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Gm36957-201ENSMUST00000192982 2824 ntBASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1brtQ3UNC9 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Gm24420-201ENSMUST00000176676 59 ntBASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Gm9630-201ENSMUST00000178304 885 ntBASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Gm10060-201ENSMUST00000212002 111 ntBASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms