Protein–RNA interactions for Protein: Q3ULP7

Ctsll3, Cathepsin L-like 3, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctsll3Q3ULP7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ctsll3Q3ULP7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ctsll3Q3ULP7 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.48□□□□□ -0.57
Ctsll3Q3ULP7 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ctsll3Q3ULP7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ctsll3Q3ULP7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ctsll3Q3ULP7 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ctsll3Q3ULP7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ctsll3Q3ULP7 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ctsll3Q3ULP7 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ctsll3Q3ULP7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ctsll3Q3ULP7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ctsll3Q3ULP7 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ctsll3Q3ULP7 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Gm13035-201ENSMUST00000117496 342 ntBASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ctsll3Q3ULP7 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Gm12501-201ENSMUST00000119163 529 ntBASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Gm11667-201ENSMUST00000119828 486 ntBASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Gm15703-201ENSMUST00000120250 880 ntBASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Gm37246-201ENSMUST00000192665 835 ntBASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Gm1821-202ENSMUST00000227415 750 ntBASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ctsll3Q3ULP7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ctsll3Q3ULP7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
Ctsll3Q3ULP7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ctsll3Q3ULP7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms