Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Gm5356-201ENSMUST00000093326 615 ntBASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cul4aQ3TCH7 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.15□□□□□ -0.31
Cul4aQ3TCH7 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Cul4aQ3TCH7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Cul4aQ3TCH7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cul4aQ3TCH7 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.15□□□□□ -0.31
Cul4aQ3TCH7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Gm9022-201ENSMUST00000182482 992 ntBASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Gm27243-201ENSMUST00000183964 521 ntBASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Gm6745-201ENSMUST00000199216 526 ntBASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cul4aQ3TCH7 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cul4aQ3TCH7 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.13□□□□□ -0.31
Cul4aQ3TCH7 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Cul4aQ3TCH7 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cul4aQ3TCH7 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cul4aQ3TCH7 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cul4aQ3TCH7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cul4aQ3TCH7 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cul4aQ3TCH7 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cul4aQ3TCH7 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cul4aQ3TCH7 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.13□□□□□ -0.31
Cul4aQ3TCH7 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.13□□□□□ -0.31
Cul4aQ3TCH7 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms