Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC10.26□□□□□ -0.77
Trim63Q38HM4 Olfr129-201ENSMUST00000122318 993 ntBASIC10.26□□□□□ -0.77
Trim63Q38HM4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC10.26□□□□□ -0.77
Trim63Q38HM4 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.26□□□□□ -0.77
Trim63Q38HM4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC10.26□□□□□ -0.77
Trim63Q38HM4 Gm10154-201ENSMUST00000084445 354 ntBASIC10.26□□□□□ -0.77
Trim63Q38HM4 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.26□□□□□ -0.77
Trim63Q38HM4 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim63Q38HM4 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Gm37584-201ENSMUST00000193595 1290 ntBASIC10.25□□□□□ -0.77
Trim63Q38HM4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Gm5364-201ENSMUST00000216789 889 ntBASIC10.25□□□□□ -0.77
Trim63Q38HM4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.25□□□□□ -0.77
Trim63Q38HM4 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim63Q38HM4 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms