Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 AC153544.1-201ENSMUST00000217988 400 ntBASIC12.27□□□□□ -0.45
Atf4Q06507 Gm272-201ENSMUST00000222073 919 ntBASIC12.27□□□□□ -0.45
Atf4Q06507 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Atf4Q06507 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Atf4Q06507 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 AC151904.4-201ENSMUST00000219868 1319 ntBASIC12.27□□□□□ -0.45
Atf4Q06507 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.27□□□□□ -0.45
Atf4Q06507 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Atf4Q06507 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Atf4Q06507 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf4Q06507 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Atf4Q06507 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.26□□□□□ -0.45
Atf4Q06507 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Atf4Q06507 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Atf4Q06507 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Atf4Q06507 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC12.26□□□□□ -0.45
Atf4Q06507 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Atf4Q06507 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Gm38144-201ENSMUST00000192790 465 ntBASIC12.26□□□□□ -0.45
Atf4Q06507 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.26□□□□□ -0.45
Atf4Q06507 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC12.26□□□□□ -0.45
Atf4Q06507 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC12.26□□□□□ -0.45
Atf4Q06507 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC12.26□□□□□ -0.45
Atf4Q06507 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.26□□□□□ -0.45
Atf4Q06507 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Atf4Q06507 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Atf4Q06507 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.26□□□□□ -0.45
Atf4Q06507 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Atf4Q06507 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Atf4Q06507 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.26□□□□□ -0.45
Atf4Q06507 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.26□□□□□ -0.45
Atf4Q06507 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.26□□□□□ -0.45
Atf4Q06507 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Atf4Q06507 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atf4Q06507 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.25□□□□□ -0.45
Atf4Q06507 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Atf4Q06507 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Atf4Q06507 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.25□□□□□ -0.45
Atf4Q06507 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.25□□□□□ -0.45
Atf4Q06507 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.25□□□□□ -0.45
Atf4Q06507 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.25□□□□□ -0.45
Atf4Q06507 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atf4Q06507 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms