Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Sox9Q04887 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox9Q04887 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox9Q04887 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Sox9Q04887 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox9Q04887 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox9Q04887 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox9Q04887 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.96□□□□□ -0.34
Sox9Q04887 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox9Q04887 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox9Q04887 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.96□□□□□ -0.34
Sox9Q04887 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox9Q04887 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox9Q04887 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Sox9Q04887 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.95□□□□□ -0.34
Sox9Q04887 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sox9Q04887 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sox9Q04887 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Acot6-202ENSMUST00000222921 3622 ntBASIC12.95□□□□□ -0.34
Sox9Q04887 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.95□□□□□ -0.34
Sox9Q04887 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.95□□□□□ -0.34
Sox9Q04887 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.95□□□□□ -0.34
Sox9Q04887 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.95□□□□□ -0.34
Sox9Q04887 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.95□□□□□ -0.34
Sox9Q04887 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Gm5298-201ENSMUST00000201122 892 ntBASIC12.95□□□□□ -0.34
Sox9Q04887 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.95□□□□□ -0.34
Sox9Q04887 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.95□□□□□ -0.34
Sox9Q04887 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.95□□□□□ -0.34
Sox9Q04887 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox9Q04887 Arhgef33-207ENSMUST00000224966 490 ntBASIC12.95□□□□□ -0.34
Sox9Q04887 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.95□□□□□ -0.34
Sox9Q04887 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.95□□□□□ -0.34
Sox9Q04887 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox9Q04887 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Sox9Q04887 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox9Q04887 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sox9Q04887 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sox9Q04887 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Sox9Q04887 Gm11989-201ENSMUST00000117240 672 ntBASIC12.94□□□□□ -0.34
Sox9Q04887 Gm11362-201ENSMUST00000118838 850 ntBASIC12.94□□□□□ -0.34
Sox9Q04887 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.94□□□□□ -0.34
Sox9Q04887 Gm4726-201ENSMUST00000135604 736 ntBASIC12.94□□□□□ -0.34
Sox9Q04887 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.94□□□□□ -0.34
Sox9Q04887 Gm6019-201ENSMUST00000148369 736 ntBASIC12.94□□□□□ -0.34
Sox9Q04887 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Sox9Q04887 Gm23771-201ENSMUST00000178702 110 ntBASIC12.94□□□□□ -0.34
Sox9Q04887 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.94□□□□□ -0.34
Sox9Q04887 Gm27910-201ENSMUST00000185004 107 ntBASIC12.94□□□□□ -0.34
Sox9Q04887 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.94□□□□□ -0.34
Sox9Q04887 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.94□□□□□ -0.34
Sox9Q04887 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.94□□□□□ -0.34
Sox9Q04887 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.94□□□□□ -0.34
Sox9Q04887 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox9Q04887 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms