Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.91□□□□□ -0.5
Cxcr5Q04683 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.91□□□□□ -0.5
Cxcr5Q04683 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.91□□□□□ -0.5
Cxcr5Q04683 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.91□□□□□ -0.5
Cxcr5Q04683 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Gm8810-201ENSMUST00000172895 754 ntBASIC11.91□□□□□ -0.5
Cxcr5Q04683 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Cxcr5Q04683 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.91□□□□□ -0.5
Cxcr5Q04683 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cxcr5Q04683 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.91□□□□□ -0.5
Cxcr5Q04683 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcr5Q04683 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Gm12203-201ENSMUST00000118235 598 ntBASIC11.9□□□□□ -0.5
Cxcr5Q04683 Gm13369-201ENSMUST00000119442 987 ntBASIC11.9□□□□□ -0.5
Cxcr5Q04683 Gm11803-201ENSMUST00000119966 444 ntBASIC11.9□□□□□ -0.5
Cxcr5Q04683 Gm12209-201ENSMUST00000120089 596 ntBASIC11.9□□□□□ -0.5
Cxcr5Q04683 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.9□□□□□ -0.5
Cxcr5Q04683 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.9□□□□□ -0.5
Cxcr5Q04683 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.9□□□□□ -0.5
Cxcr5Q04683 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cxcr5Q04683 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Cxcr5Q04683 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Cxcr5Q04683 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms