Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Gm45784-201ENSMUST00000188360 142 ntBASIC12.73□□□□□ -0.37
Gabpb1Q00420 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Gm45925-201ENSMUST00000218882 744 ntBASIC12.73□□□□□ -0.37
Gabpb1Q00420 Gm5781-201ENSMUST00000219792 443 ntBASIC12.73□□□□□ -0.37
Gabpb1Q00420 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabpb1Q00420 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.72□□□□□ -0.37
Gabpb1Q00420 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Gm7809-201ENSMUST00000153199 742 ntBASIC12.72□□□□□ -0.37
Gabpb1Q00420 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Gm8738-201ENSMUST00000172606 329 ntBASIC12.72□□□□□ -0.37
Gabpb1Q00420 Gm9022-201ENSMUST00000182482 992 ntBASIC12.72□□□□□ -0.37
Gabpb1Q00420 Gm27390-201ENSMUST00000184516 176 ntBASIC12.72□□□□□ -0.37
Gabpb1Q00420 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.72□□□□□ -0.37
Gabpb1Q00420 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.72□□□□□ -0.37
Gabpb1Q00420 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.72□□□□□ -0.37
Gabpb1Q00420 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.72□□□□□ -0.37
Gabpb1Q00420 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.72□□□□□ -0.37
Gabpb1Q00420 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Gm22058-201ENSMUST00000083393 310 ntBASIC12.72□□□□□ -0.37
Gabpb1Q00420 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.72□□□□□ -0.37
Gabpb1Q00420 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.72□□□□□ -0.37
Gabpb1Q00420 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.72□□□□□ -0.37
Gabpb1Q00420 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabpb1Q00420 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gabpb1Q00420 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gabpb1Q00420 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Gabpb1Q00420 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gabpb1Q00420 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Gabpb1Q00420 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Gabpb1Q00420 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gabpb1Q00420 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gabpb1Q00420 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
Gabpb1Q00420 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gabpb1Q00420 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Gabpb1Q00420 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gabpb1Q00420 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gabpb1Q00420 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gabpb1Q00420 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Gabpb1Q00420 Gm13226-201ENSMUST00000117838 404 ntBASIC12.71□□□□□ -0.37
Gabpb1Q00420 Gm14660-201ENSMUST00000119809 575 ntBASIC12.71□□□□□ -0.37
Gabpb1Q00420 Gm11597-201ENSMUST00000121423 964 ntBASIC12.71□□□□□ -0.37
Gabpb1Q00420 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
Gabpb1Q00420 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms