Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Gm2546-201ENSMUST00000182630 991 ntBASIC10.4□□□□□ -0.74
Gfra1P97785 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.4□□□□□ -0.74
Gfra1P97785 Gm27243-201ENSMUST00000183964 521 ntBASIC10.4□□□□□ -0.74
Gfra1P97785 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.4□□□□□ -0.74
Gfra1P97785 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gfra1P97785 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.4□□□□□ -0.74
Gfra1P97785 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.4□□□□□ -0.74
Gfra1P97785 Gm30285-201ENSMUST00000214614 422 ntBASIC10.4□□□□□ -0.74
Gfra1P97785 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.4□□□□□ -0.74
Gfra1P97785 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.4□□□□□ -0.74
Gfra1P97785 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.4□□□□□ -0.74
Gfra1P97785 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gfra1P97785 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Gfra1P97785 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gfra1P97785 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gfra1P97785 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gfra1P97785 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gfra1P97785 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gfra1P97785 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gfra1P97785 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gfra1P97785 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.4□□□□□ -0.74
Gfra1P97785 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.4□□□□□ -0.74
Gfra1P97785 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gfra1P97785 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Gfra1P97785 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gfra1P97785 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Gfra1P97785 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gfra1P97785 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gfra1P97785 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.4□□□□□ -0.75
Gfra1P97785 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.75
Gfra1P97785 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gfra1P97785 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Gfra1P97785 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Gfra1P97785 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gfra1P97785 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Paupar-201ENSMUST00000194826 3482 ntBASIC10.39□□□□□ -0.75
Gfra1P97785 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Gfra1P97785 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Gfra1P97785 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.39□□□□□ -0.75
Gfra1P97785 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Gm12058-201ENSMUST00000118614 437 ntBASIC10.39□□□□□ -0.75
Gfra1P97785 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.39□□□□□ -0.75
Gfra1P97785 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.39□□□□□ -0.75
Gfra1P97785 Gm31256-201ENSMUST00000194705 506 ntBASIC10.39□□□□□ -0.75
Gfra1P97785 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.39□□□□□ -0.75
Gfra1P97785 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.39□□□□□ -0.75
Gfra1P97785 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.39□□□□□ -0.75
Gfra1P97785 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Gfra1P97785 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.39□□□□□ -0.75
Gfra1P97785 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.39□□□□□ -0.75
Gfra1P97785 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Gfra1P97785 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gfra1P97785 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Gfra1P97785 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.38□□□□□ -0.75
Gfra1P97785 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Gfra1P97785 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.38□□□□□ -0.75
Gfra1P97785 Gm8018-201ENSMUST00000173536 789 ntBASIC10.38□□□□□ -0.75
Gfra1P97785 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.38□□□□□ -0.75
Gfra1P97785 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.38□□□□□ -0.75
Gfra1P97785 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.38□□□□□ -0.75
Gfra1P97785 Gm37201-201ENSMUST00000191845 523 ntBASIC10.38□□□□□ -0.75
Gfra1P97785 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.38□□□□□ -0.75
Gfra1P97785 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.38□□□□□ -0.75
Gfra1P97785 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.38□□□□□ -0.75
Gfra1P97785 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms