Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Gm44551-201ENSMUST00000208804 171 ntBASIC15.68■□□□□ 0.1
Nkx2-3P97334 AC141438.2-201ENSMUST00000215068 271 ntBASIC15.68■□□□□ 0.1
Nkx2-3P97334 Gm1821-202ENSMUST00000227415 750 ntBASIC15.68■□□□□ 0.1
Nkx2-3P97334 AC135114.1-201ENSMUST00000228682 270 ntBASIC15.68■□□□□ 0.1
Nkx2-3P97334 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-3P97334 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-3P97334 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.67■□□□□ 0.1
Nkx2-3P97334 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-3P97334 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Gm26286-201ENSMUST00000104166 134 ntBASIC15.67■□□□□ 0.1
Nkx2-3P97334 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC15.67■□□□□ 0.1
Nkx2-3P97334 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Gm19459-201ENSMUST00000176240 835 ntBASIC15.67■□□□□ 0.1
Nkx2-3P97334 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Gm10752-201ENSMUST00000218348 729 ntBASIC15.67■□□□□ 0.1
Nkx2-3P97334 AC169036.1-201ENSMUST00000227994 296 ntBASIC15.67■□□□□ 0.1
Nkx2-3P97334 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.67■□□□□ 0.1
Nkx2-3P97334 Gm9361-201ENSMUST00000198695 1507 ntBASIC15.67■□□□□ 0.1
Nkx2-3P97334 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-3P97334 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-3P97334 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC15.66■□□□□ 0.1
Nkx2-3P97334 Gm8199-201ENSMUST00000121323 823 ntBASIC15.66■□□□□ 0.1
Nkx2-3P97334 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Gm807-202ENSMUST00000224929 408 ntBASIC15.66■□□□□ 0.1
Nkx2-3P97334 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-3P97334 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Gm9785-201ENSMUST00000062642 1006 ntBASIC15.66■□□□□ 0.1
Nkx2-3P97334 Ginm1-202ENSMUST00000065124 300 ntBASIC15.66■□□□□ 0.1
Nkx2-3P97334 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Gm26448-201ENSMUST00000082446 203 ntBASIC15.66■□□□□ 0.1
Nkx2-3P97334 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-3P97334 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-3P97334 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-3P97334 Gm37131-201ENSMUST00000192502 1561 ntBASIC15.66■□□□□ 0.1
Nkx2-3P97334 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Gm37513-201ENSMUST00000194830 2268 ntBASIC15.65■□□□□ 0.1
Nkx2-3P97334 Gm38378-201ENSMUST00000195153 2268 ntBASIC15.65■□□□□ 0.1
Nkx2-3P97334 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC15.65■□□□□ 0.1
Nkx2-3P97334 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Gm12501-201ENSMUST00000119163 529 ntBASIC15.65■□□□□ 0.1
Nkx2-3P97334 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Gm12208-201ENSMUST00000122004 163 ntBASIC15.65■□□□□ 0.1
Nkx2-3P97334 Gm6397-201ENSMUST00000161973 1069 ntBASIC15.65■□□□□ 0.1
Nkx2-3P97334 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Nkx2-3P97334 Mir7677-201ENSMUST00000184226 67 ntBASIC15.65■□□□□ 0.1
Nkx2-3P97334 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms