Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim43bP86448 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trim43bP86448 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43bP86448 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43bP86448 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43bP86448 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43bP86448 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim43bP86448 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Trim43bP86448 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim43bP86448 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.92□□□□□ -0.34
Trim43bP86448 Gm6447-201ENSMUST00000118905 835 ntBASIC12.92□□□□□ -0.34
Trim43bP86448 Gm14660-201ENSMUST00000119809 575 ntBASIC12.92□□□□□ -0.34
Trim43bP86448 Gm11803-201ENSMUST00000119966 444 ntBASIC12.92□□□□□ -0.34
Trim43bP86448 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim43bP86448 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim43bP86448 Mir1938-201ENSMUST00000158746 100 ntBASIC12.92□□□□□ -0.34
Trim43bP86448 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim43bP86448 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim43bP86448 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim43bP86448 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43bP86448 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim43bP86448 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43bP86448 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43bP86448 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43bP86448 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43bP86448 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Trim43bP86448 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43bP86448 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43bP86448 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim43bP86448 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43bP86448 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim43bP86448 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim43bP86448 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Trim43bP86448 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Proscos-202ENSMUST00000178990 666 ntBASIC12.91□□□□□ -0.34
Trim43bP86448 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim43bP86448 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.91□□□□□ -0.34
Trim43bP86448 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim43bP86448 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.91□□□□□ -0.34
Trim43bP86448 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.91□□□□□ -0.34
Trim43bP86448 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.91□□□□□ -0.34
Trim43bP86448 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim43bP86448 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.91□□□□□ -0.34
Trim43bP86448 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.91□□□□□ -0.34
Trim43bP86448 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43bP86448 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.91□□□□□ -0.34
Trim43bP86448 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim43bP86448 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43bP86448 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43bP86448 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim43bP86448 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43bP86448 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43bP86448 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43bP86448 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43bP86448 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43bP86448 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43bP86448 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim43bP86448 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim43bP86448 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim43bP86448 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43bP86448 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim43bP86448 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43bP86448 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim43bP86448 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim43bP86448 Gm19184-201ENSMUST00000196798 928 ntBASIC12.9□□□□□ -0.34
Trim43bP86448 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Trim43bP86448 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim43bP86448 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43bP86448 Gm8598-201ENSMUST00000221184 836 ntBASIC12.9□□□□□ -0.34
Trim43bP86448 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43bP86448 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim43bP86448 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43bP86448 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim43bP86448 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43bP86448 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43bP86448 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43bP86448 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms