Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Msx3P70354 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Msx3P70354 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Msx3P70354 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Msx3P70354 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.88□□□□□ -0.35
Msx3P70354 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Msx3P70354 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Msx3P70354 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Msx3P70354 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Msx3P70354 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Msx3P70354 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.87□□□□□ -0.35
Msx3P70354 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
Msx3P70354 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.87□□□□□ -0.35
Msx3P70354 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Msx3P70354 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Msx3P70354 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
Msx3P70354 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.87□□□□□ -0.35
Msx3P70354 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.87□□□□□ -0.35
Msx3P70354 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 Gm8602-201ENSMUST00000184045 607 ntBASIC12.87□□□□□ -0.35
Msx3P70354 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Msx3P70354 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.87□□□□□ -0.35
Msx3P70354 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.87□□□□□ -0.35
Msx3P70354 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Msx3P70354 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.87□□□□□ -0.35
Msx3P70354 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Msx3P70354 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Msx3P70354 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.87□□□□□ -0.35
Msx3P70354 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Msx3P70354 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.87□□□□□ -0.35
Msx3P70354 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.87□□□□□ -0.35
Msx3P70354 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.87□□□□□ -0.35
Msx3P70354 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Msx3P70354 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Msx3P70354 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.86□□□□□ -0.35
Msx3P70354 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Msx3P70354 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Msx3P70354 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
Msx3P70354 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Msx3P70354 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Msx3P70354 Gm11591-201ENSMUST00000120063 702 ntBASIC12.86□□□□□ -0.35
Msx3P70354 Gm12502-201ENSMUST00000120197 444 ntBASIC12.86□□□□□ -0.35
Msx3P70354 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 Gm16379-201ENSMUST00000161469 348 ntBASIC12.86□□□□□ -0.35
Msx3P70354 Gm25927-201ENSMUST00000175058 117 ntBASIC12.86□□□□□ -0.35
Msx3P70354 Gm27243-201ENSMUST00000183964 521 ntBASIC12.86□□□□□ -0.35
Msx3P70354 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 Gm8762-201ENSMUST00000193486 339 ntBASIC12.86□□□□□ -0.35
Msx3P70354 Gm6007-201ENSMUST00000208170 823 ntBASIC12.86□□□□□ -0.35
Msx3P70354 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.86□□□□□ -0.35
Msx3P70354 Gm45925-201ENSMUST00000218882 744 ntBASIC12.86□□□□□ -0.35
Msx3P70354 Gm5781-201ENSMUST00000219792 443 ntBASIC12.86□□□□□ -0.35
Msx3P70354 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Msx3P70354 Gm22058-201ENSMUST00000083393 310 ntBASIC12.86□□□□□ -0.35
Msx3P70354 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.86□□□□□ -0.35
Msx3P70354 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Msx3P70354 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Msx3P70354 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Msx3P70354 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.86□□□□□ -0.35
Msx3P70354 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Msx3P70354 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.86□□□□□ -0.35
Msx3P70354 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms