Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Syt7-205ENSMUST00000224135 1557 ntBASIC8.98□□□□□ -0.97
Cks1bP61025 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1bP61025 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1bP61025 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Cks1bP61025 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1bP61025 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1bP61025 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1bP61025 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1bP61025 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1bP61025 Gm14452-201ENSMUST00000118680 1632 ntBASIC8.98□□□□□ -0.97
Cks1bP61025 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1bP61025 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Cks1bP61025 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1bP61025 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cks1bP61025 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC8.98□□□□□ -0.97
Cks1bP61025 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
Cks1bP61025 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC8.98□□□□□ -0.97
Cks1bP61025 Gm43174-201ENSMUST00000195914 2445 ntBASIC8.97□□□□□ -0.97
Cks1bP61025 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Gm42863-201ENSMUST00000197875 2958 ntBASIC8.97□□□□□ -0.97
Cks1bP61025 Gm13859-201ENSMUST00000119936 1423 ntBASIC8.97□□□□□ -0.97
Cks1bP61025 AC124751.1-201ENSMUST00000222716 1408 ntBASIC8.97□□□□□ -0.97
Cks1bP61025 Gm28323-201ENSMUST00000186817 2499 ntBASIC8.97□□□□□ -0.97
Cks1bP61025 Gm8617-201ENSMUST00000118796 2222 ntBASIC8.97□□□□□ -0.97
Cks1bP61025 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC8.97□□□□□ -0.97
Cks1bP61025 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC8.97□□□□□ -0.97
Cks1bP61025 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Gm43727-201ENSMUST00000198021 2647 ntBASIC8.97□□□□□ -0.97
Cks1bP61025 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC8.97□□□□□ -0.97
Cks1bP61025 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC8.97□□□□□ -0.97
Cks1bP61025 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC8.97□□□□□ -0.97
Cks1bP61025 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC8.97□□□□□ -0.97
Cks1bP61025 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC8.97□□□□□ -0.97
Cks1bP61025 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cks1bP61025 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Cks1bP61025 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Cks1bP61025 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Cks1bP61025 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Cks1bP61025 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC8.97□□□□□ -0.97
Cks1bP61025 Gm45191-201ENSMUST00000205846 5439 ntBASIC8.97□□□□□ -0.97
Cks1bP61025 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Cks1bP61025 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC8.97□□□□□ -0.97
Cks1bP61025 Ptprm-203ENSMUST00000224091 3773 ntBASIC8.97□□□□□ -0.97
Cks1bP61025 Gm2128-201ENSMUST00000108009 2560 ntBASIC8.97□□□□□ -0.97
Cks1bP61025 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cks1bP61025 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Gm6092-201ENSMUST00000121659 2029 ntBASIC8.97□□□□□ -0.97
Cks1bP61025 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Cks1bP61025 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cks1bP61025 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1bP61025 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1bP61025 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1bP61025 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1bP61025 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1bP61025 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1bP61025 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1bP61025 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC8.96□□□□□ -0.97
Cks1bP61025 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1bP61025 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1bP61025 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cks1bP61025 Gm12585-201ENSMUST00000117307 290 ntBASIC8.96□□□□□ -0.98
Cks1bP61025 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC8.96□□□□□ -0.98
Cks1bP61025 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC8.96□□□□□ -0.98
Cks1bP61025 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC8.96□□□□□ -0.98
Cks1bP61025 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC8.96□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms