Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Tpm1P58771 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Tpm1P58771 Gm14350-201ENSMUST00000116642 640 ntBASIC13.98□□□□□ -0.17
Tpm1P58771 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.98□□□□□ -0.17
Tpm1P58771 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.98□□□□□ -0.17
Tpm1P58771 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.98□□□□□ -0.17
Tpm1P58771 Gm6983-201ENSMUST00000214912 628 ntBASIC13.98□□□□□ -0.17
Tpm1P58771 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Tpm1P58771 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.98□□□□□ -0.17
Tpm1P58771 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Tpm1P58771 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Tpm1P58771 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Tpm1P58771 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Tpm1P58771 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.97□□□□□ -0.17
Tpm1P58771 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.97□□□□□ -0.17
Tpm1P58771 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Tpm1P58771 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.97□□□□□ -0.17
Tpm1P58771 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Tpm1P58771 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.97□□□□□ -0.17
Tpm1P58771 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Gm12291-201ENSMUST00000121627 311 ntBASIC13.97□□□□□ -0.17
Tpm1P58771 Gm14719-201ENSMUST00000121891 340 ntBASIC13.97□□□□□ -0.17
Tpm1P58771 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Tpm1P58771 Gm7063-201ENSMUST00000186840 981 ntBASIC13.97□□□□□ -0.17
Tpm1P58771 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.97□□□□□ -0.17
Tpm1P58771 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Gm26035-201ENSMUST00000083065 308 ntBASIC13.97□□□□□ -0.17
Tpm1P58771 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Tpm1P58771 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Tpm1P58771 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.97□□□□□ -0.17
Tpm1P58771 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.97□□□□□ -0.17
Tpm1P58771 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.97□□□□□ -0.17
Tpm1P58771 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Tpm1P58771 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.97□□□□□ -0.17
Tpm1P58771 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tpm1P58771 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm1P58771 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm1P58771 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm1P58771 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm1P58771 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm1P58771 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Tpm1P58771 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm1P58771 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm1P58771 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm1P58771 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.96□□□□□ -0.17
Tpm1P58771 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Tpm1P58771 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm1P58771 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm1P58771 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm1P58771 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm1P58771 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.96□□□□□ -0.17
Tpm1P58771 Gm7730-201ENSMUST00000212486 454 ntBASIC13.96□□□□□ -0.17
Tpm1P58771 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.96□□□□□ -0.17
Tpm1P58771 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Tpm1P58771 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Tpm1P58771 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm1P58771 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tpm1P58771 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.96□□□□□ -0.18
Tpm1P58771 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tpm1P58771 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Tpm1P58771 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tpm1P58771 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Tpm1P58771 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms