Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp1P56183 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp1P56183 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp1P56183 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.13□□□□□ -0.15
Rrp1P56183 Gm8810-201ENSMUST00000172895 754 ntBASIC14.13□□□□□ -0.15
Rrp1P56183 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.13□□□□□ -0.15
Rrp1P56183 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rrp1P56183 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp1P56183 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp1P56183 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp1P56183 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.13□□□□□ -0.15
Rrp1P56183 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp1P56183 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp1P56183 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.13□□□□□ -0.15
Rrp1P56183 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp1P56183 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rrp1P56183 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp1P56183 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp1P56183 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rrp1P56183 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.13□□□□□ -0.15
Rrp1P56183 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp1P56183 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp1P56183 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp1P56183 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.12□□□□□ -0.15
Rrp1P56183 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp1P56183 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp1P56183 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp1P56183 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rrp1P56183 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp1P56183 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.12□□□□□ -0.15
Rrp1P56183 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.12□□□□□ -0.15
Rrp1P56183 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Rrp1P56183 Gm12203-201ENSMUST00000118235 598 ntBASIC14.12□□□□□ -0.15
Rrp1P56183 Gm12209-201ENSMUST00000120089 596 ntBASIC14.12□□□□□ -0.15
Rrp1P56183 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp1P56183 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp1P56183 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp1P56183 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp1P56183 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp1P56183 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.12□□□□□ -0.15
Rrp1P56183 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp1P56183 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp1P56183 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp1P56183 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp1P56183 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.12□□□□□ -0.15
Rrp1P56183 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp1P56183 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Rrp1P56183 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp1P56183 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rrp1P56183 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rrp1P56183 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.12□□□□□ -0.15
Rrp1P56183 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rrp1P56183 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC14.11□□□□□ -0.15
Rrp1P56183 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rrp1P56183 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.11□□□□□ -0.15
Rrp1P56183 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.11□□□□□ -0.15
Rrp1P56183 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.11□□□□□ -0.15
Rrp1P56183 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.11□□□□□ -0.15
Rrp1P56183 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.11□□□□□ -0.15
Rrp1P56183 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.11□□□□□ -0.15
Rrp1P56183 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.11□□□□□ -0.15
Rrp1P56183 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.11□□□□□ -0.15
Rrp1P56183 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rrp1P56183 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rrp1P56183 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rrp1P56183 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp1P56183 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.1□□□□□ -0.15
Rrp1P56183 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp1P56183 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Rrp1P56183 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp1P56183 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rrp1P56183 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms