Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.05□□□□□ -0.48
Sox3P53784 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Sox3P53784 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sox3P53784 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.05□□□□□ -0.48
Sox3P53784 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.05□□□□□ -0.48
Sox3P53784 Gm14350-201ENSMUST00000116642 640 ntBASIC12.05□□□□□ -0.48
Sox3P53784 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 Gm15276-201ENSMUST00000145953 498 ntBASIC12.05□□□□□ -0.48
Sox3P53784 Gm20426-201ENSMUST00000173657 440 ntBASIC12.05□□□□□ -0.48
Sox3P53784 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.05□□□□□ -0.48
Sox3P53784 Gm37042-201ENSMUST00000193816 581 ntBASIC12.05□□□□□ -0.48
Sox3P53784 Gm44100-201ENSMUST00000204329 436 ntBASIC12.05□□□□□ -0.48
Sox3P53784 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.05□□□□□ -0.48
Sox3P53784 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.05□□□□□ -0.48
Sox3P53784 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sox3P53784 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Sox3P53784 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sox3P53784 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
Sox3P53784 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox3P53784 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.04□□□□□ -0.48
Sox3P53784 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox3P53784 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.04□□□□□ -0.48
Sox3P53784 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox3P53784 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Gm10434-201ENSMUST00000101158 471 ntBASIC12.04□□□□□ -0.48
Sox3P53784 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.04□□□□□ -0.48
Sox3P53784 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.04□□□□□ -0.48
Sox3P53784 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.04□□□□□ -0.48
Sox3P53784 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Sox3P53784 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox3P53784 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox3P53784 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.04□□□□□ -0.48
Sox3P53784 Gm18584-201ENSMUST00000203098 964 ntBASIC12.04□□□□□ -0.48
Sox3P53784 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox3P53784 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sox3P53784 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.04□□□□□ -0.48
Sox3P53784 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.04□□□□□ -0.48
Sox3P53784 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.04□□□□□ -0.48
Sox3P53784 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Sox3P53784 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox3P53784 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Sox3P53784 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.03□□□□□ -0.48
Sox3P53784 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.03□□□□□ -0.48
Sox3P53784 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sox3P53784 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.03□□□□□ -0.48
Sox3P53784 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sox3P53784 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms