Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lbx1P52955 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.16□□□□□ -0.46
Lbx1P52955 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Lbx1P52955 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Lbx1P52955 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Lbx1P52955 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.16□□□□□ -0.46
Lbx1P52955 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Lbx1P52955 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Lbx1P52955 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.16□□□□□ -0.46
Lbx1P52955 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.16□□□□□ -0.46
Lbx1P52955 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lbx1P52955 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lbx1P52955 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.15□□□□□ -0.46
Lbx1P52955 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Lbx1P52955 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.15□□□□□ -0.46
Lbx1P52955 Gng5-ps-201ENSMUST00000120931 205 ntBASIC12.15□□□□□ -0.46
Lbx1P52955 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.15□□□□□ -0.46
Lbx1P52955 Defa-ps17-201ENSMUST00000121849 171 ntBASIC12.15□□□□□ -0.46
Lbx1P52955 Gm8756-201ENSMUST00000183250 929 ntBASIC12.15□□□□□ -0.46
Lbx1P52955 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.15□□□□□ -0.46
Lbx1P52955 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.15□□□□□ -0.46
Lbx1P52955 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.15□□□□□ -0.46
Lbx1P52955 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lbx1P52955 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lbx1P52955 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.15□□□□□ -0.46
Lbx1P52955 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Lbx1P52955 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lbx1P52955 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
Lbx1P52955 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lbx1P52955 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Lbx1P52955 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Lbx1P52955 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Lbx1P52955 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Lbx1P52955 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.14□□□□□ -0.47
Lbx1P52955 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.14□□□□□ -0.47
Lbx1P52955 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.14□□□□□ -0.47
Lbx1P52955 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.14□□□□□ -0.47
Lbx1P52955 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.14□□□□□ -0.47
Lbx1P52955 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Lbx1P52955 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Lbx1P52955 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.14□□□□□ -0.47
Lbx1P52955 Gm13916-201ENSMUST00000117368 628 ntBASIC12.14□□□□□ -0.47
Lbx1P52955 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.14□□□□□ -0.47
Lbx1P52955 Gm12712-201ENSMUST00000120676 801 ntBASIC12.14□□□□□ -0.47
Lbx1P52955 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.14□□□□□ -0.47
Lbx1P52955 Gm4462-201ENSMUST00000166453 492 ntBASIC12.14□□□□□ -0.47
Lbx1P52955 Gm9135-201ENSMUST00000182963 990 ntBASIC12.14□□□□□ -0.47
Lbx1P52955 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lbx1P52955 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.14□□□□□ -0.47
Lbx1P52955 Gm43186-201ENSMUST00000198130 824 ntBASIC12.14□□□□□ -0.47
Lbx1P52955 Gm43969-201ENSMUST00000204833 535 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms